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Bioinformatics
Data Management Software
General Scientific Software
Molecular Modeling
Software for Crystallography
Software for Genetics
Software for general Biology
Software for general Chemistry

Surf these sites:
 AcaClone pDRAW32 -- Freeware DNA cloning, analysis and visualization software.
Alternative Gene Splicing Database -- Information about alternatively spliced genes, their products, and expression patterns, which can be searched for a given tissue or organism, or for variants generated from a particular transcript - from the Lawrence Berkeley National Lab.
Amphi Program -- This program provides algorithms to calculate three amphipathic characteristics of a given amino acid sequence: (i) the hydrophobicity of segments of 7 amino acid residues,(ii) the hydrophobicity of segments of 19 amino acid residues, (iii) the amphipathy of alpha-helices of 20 residues, and (iv) the amphipathy of beta-strands of 10 residues.
BioKin -- Produces software for data analysis in enzyme kinetics, receptor binding, and viral dynamics. Also provide consulting services and custom-software development for high-throughput screening in drug discovery.
Biochemistry, Thermodynamics, and Structure of Nucleic Acids -- Computational tools from John SantaLucia''s Lab. - Wayne State Univ.
Biotechnology and Biosciences Spell-Checking Software Dictionary -- Biotechnology spell-checking software for words in the biosciences: molecular biology, biomedicine, microbiology,biochemistry (for Microsoft Word, Corel Wordperfect, Lotus).
CloneMap version 2.11 -- a complete solution for fast and easy plasmid map drawing,restriction site mapping, and virtual cloning.
Equilibrate Web site -- Equilibrate software can be used as a scientific or educational tool in biochemistry and molecular biology for quantitative analysis of molecular interactions. This includes calculation of the steady state equilibrium, calculation of the dissociation constant (KD), and statistical evaluation of Scatchard analysis data.
Forager -- PC software that calculates equilibria of molecules that physically interact with each other.
Free Software for Molecular Biology -- Gopher site listing over 150 free software programs in molecular biology and related areas - from Indiana Univ. Program files found at: gopher://iubio.bio.indiana.edu:70/11/IUBio-Software+Data/molbio.
Genamics SoftwareSeek -- Very comprehensive searchable directory of molecular biology, genetics and biochemistry online tools and software for MacOS, Windows, Unix and Linux.
MacPlasmap version 2.1 -- an easy-to-use color drawing program for preparation of circular and linear plasmid maps.
MeltCalc99 -- Downloadable program to perform thermodynamic oligonucleotide stability calculations and optimization; only software application to automatically optimize LightCycler Hybridization probes - from the Univ. of Goettingen.
Oligo Software -- Oligo software is a Molecular Biology Insights product. It has been created for difficult sequencing and PCR primer design projects. First on the market (1989).
PREMIER Biosoft International -- Programs for primer & vector analysis.
PSORT WWW Server -- Analysis and prediction of protein sorting signals found in amino acid sequences.
SigmaScan Pro-Powerful Image Analysis for Your PC -- SigmaScan Pro 5.0 provides a complete image analysis package for studying the structure and size of objects in your visual information.
Webcutter 2.0 -- Free, online software for restriction mapping nucleotide sequences - from Yale Univ.

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